If you’re craving a treat that feels indulgent but is packed with nutrition, you’re going to fall in love with this High Protein Yogurt Cookie Dough Cups Recipe. These little cups combine creamy Greek yogurt with nutty butters, a hit of protein powder, and those irresistible mini chocolate chips, all frozen into bite-sized delights that are as satisfying as they are healthy. They deliver a perfect balance of sweetness, texture, and energy-boosting goodness that makes it easy to enjoy dessert guilt-free or power up your snack game anytime.

Ingredients You’ll Need
Every great recipe starts with simple, thoughtfully chosen ingredients that bring flavor, texture, and nutrition to the table. This High Protein Yogurt Cookie Dough Cups Recipe includes pantry staples that combine to create a creamy, protein-rich base with just the right hint of sweetness and crunch.
- Greek yogurt: Provides a thick, creamy base packed with protein and probiotics for a nutritious boost.
- Nut butter (almond or peanut butter): Adds richness and healthy fats, plus a smooth, nutty flavor that complements the yogurt perfectly.
- Protein powder (vanilla, chocolate, or unflavored): Enhances the protein content while infusing subtle flavor that pairs beautifully with the other ingredients.
- Sweetener (maple syrup or honey): Naturally sweetens without being overpowering, bringing warmth and depth.
- Vanilla extract: Adds a lovely aromatic note that lifts the entire mixture.
- Rolled oats or almond flour: Gives body and a slight chewiness, contributing to that classic cookie dough texture.
- Mini chocolate chips: Small bursts of melty chocolate that create a perfect contrast to the creamy mixture.
- Pinch of salt: Balances the sweetness and enhances all the flavors.
How to Make High Protein Yogurt Cookie Dough Cups Recipe
Step 1: Mix the Creamy Base
Start by combining Greek yogurt, your chosen nut butter, sweetener, and vanilla extract in a mixing bowl. Stir everything together until you get a perfectly smooth and creamy mixture. This is the foundation of your cookie dough cups, so take your time to get it just right.
Step 2: Fold in Dry Ingredients and Chips
Next, add the protein powder, rolled oats or almond flour, mini chocolate chips, and a pinch of salt to your creamy base. Mix thoroughly so that every bite has the right balance of flavors and textures. The oats or almond flour will help create the signature cookie dough feel while keeping everything wholesome.
Step 3: Portion into Cups
Line a muffin tin with paper liners to make serving and cleanup a breeze. Spoon the mixture evenly into each cup, filling them generously but leaving a little space at the top to make handling easier once frozen.
Step 4: Freeze Until Firm
Pop the filled muffin tin into the freezer and let it chill for 1 to 2 hours. This step allows the cookie dough cups to firm up perfectly, giving you that ice-cold, slightly chewy texture everyone loves.
Step 5: Let Sit Before Serving
When you’re ready to enjoy, take the cups out of the freezer and let them sit at room temperature for about 5 minutes. This slight softening makes them easier to bite into while still deliciously chilled.
How to Serve High Protein Yogurt Cookie Dough Cups Recipe

Garnishes
Sprinkle some extra mini chocolate chips, chopped nuts, or a light dusting of cinnamon on top for an added touch of flavor and flair. Fresh berries can also add a juicy contrast that pairs wonderfully with the creamy texture of these cups.
Side Dishes
These cookie dough cups stand out on their own but also complement fresh fruit salads or crunchy granola. For a breakfast twist, serve alongside a smoothie or a tall glass of your favorite milk for a balanced and delicious meal.
Creative Ways to Present
Make these cups feel extra special by layering them in clear mini jars with fruit or granola for a parfait effect. Alternatively, serve them on a pretty platter garnished with edible flowers or mint leaves to impress your guests at brunch or dessert time.
Make Ahead and Storage
Storing Leftovers
Keep any leftover High Protein Yogurt Cookie Dough Cups Recipe treats in an airtight container in the freezer for up to two weeks. This makes it super easy to grab a healthy snack on busy days without fuss.
Freezing
These cups freeze beautifully because of their thick, creamy yogurt base. Just make sure they’re well covered or stored in a sealed container to prevent freezer burn and maintain texture and flavor.
Reheating
There’s no need to reheat these cookie dough cups since they’re meant to be enjoyed cold or slightly softened. Just leave them out at room temperature for a few minutes before serving, and you’ll have the perfect bite every time.
FAQs
Can I use flavored protein powder for this recipe?
Absolutely! Flavored protein powders like vanilla or chocolate work wonderfully and add an extra depth of flavor. Just adjust the sweetener slightly if your protein powder is already sweetened.
Is it necessary to use mini chocolate chips?
Mini chocolate chips are ideal because they distribute evenly and melt just a bit, but regular-sized chips can work if you chop them into smaller pieces first.
Can I substitute the nut butter for a seed butter?
Yes, if you have nut allergies or prefer seed butters like sunflower seed butter, they make a great swap and still add creaminess and healthy fats.
How long do these cups last in the freezer?
They stay fresh and delicious for up to two weeks when stored properly in an airtight container, making them perfect for meal prep.
What’s the best way to enjoy these cups as a snack?
Enjoy them chilled straight from the freezer for a crispy bite, or let them sit a few minutes at room temperature for a creamier, softer texture that melts in your mouth.
Final Thoughts
I can’t recommend this High Protein Yogurt Cookie Dough Cups Recipe enough if you want a snack that hits all the right notes—healthy, delicious, and incredibly satisfying. It’s such a joy to whip up a batch, freeze them, and have a guilt-free indulgence ready whenever those cookie dough cravings strike. Trust me, once you try these, they’ll be your go-to treat for both energy and comfort.
Print
High Protein Yogurt Cookie Dough Cups Recipe
- Total Time: 2 hours 10 minutes
- Yield: 6 servings 1x
- Diet: Low Fat
Description
These High Protein Yogurt Cookie Dough Cups are a delicious and nutritious treat that combines creamy Greek yogurt, protein powder, and satisfying mix-ins like nut butter, oats, and mini chocolate chips. Perfect as a snack or dessert, they are easy to prepare, require no baking, and offer a healthy dose of protein with a sweet, cookie dough flavor.
Ingredients
Main Ingredients
- 1 cup Greek yogurt
- 1/2 cup nut butter (almond or peanut butter)
- 1/3 cup protein powder (vanilla, chocolate, or unflavored)
- 3 tablespoons sweetener (maple syrup or honey)
- 1 teaspoon vanilla extract
- 1/2 cup rolled oats or almond flour
- 1/4 cup mini chocolate chips
- Pinch of salt
Instructions
- Mix Wet Ingredients: In a mixing bowl, combine Greek yogurt, nut butter, sweetener, and vanilla extract. Stir until the mixture is smooth and creamy, ensuring all ingredients are well blended.
- Add Dry Ingredients: Add protein powder, rolled oats or almond flour, mini chocolate chips, and a pinch of salt to the wet mixture. Mix thoroughly until all ingredients are evenly incorporated to form a cookie dough-like consistency.
- Prepare Muffin Tin: Line a muffin tin with paper liners to prevent sticking and make serving easier.
- Spoon Mixture: Spoon the cookie dough mixture evenly into each muffin cup, filling them up nicely.
- Freeze: Place the muffin tin in the freezer for 1 to 2 hours or until the cookie dough cups are firm to the touch.
- Serve: Remove cookie dough cups from the freezer and let them sit at room temperature for about 5 minutes before serving to soften slightly for the best texture.
Notes
- You can substitute almond flour with rolled oats for a different texture.
- Use your favorite protein powder flavor to customize taste.
- For a vegan option, choose plant-based yogurt and sweetener.
- Store cookie dough cups in an airtight container in the freezer for up to one week.
- Allow cookie dough cups to soften at room temperature before eating for best flavor and texture.
- Prep Time: 10 minutes
- Cook Time: 0 minutes
- Category: Snack
- Method: No-Cook
- Cuisine: American